variantGPS: Genomic region

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Human Genome build 37.2

dbSNP build 132

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Target SNP View

General Info
Accession Position:	NT_026437, 61669618
Chromosome Position:	14, 80669618

dbSNP Info
dbSNPId:	rs2839858
Alleles:	G/T
Polymorphism Type:	SNP

CGF Info
CGF ID	CGFID_7181
SNP500Cancer ID	DIO2-05
Alleles	T
Polymorphism Type	SNP

Click here to view Sequence View
Sequence View NT_026437:61669344-61669893 Chr14:80669344-80669893

Annotated Sequence : Displaying on + strand of chromosome

ttataatcatacctttaaccagctaatctagttttctttcatctcttgctgaaattcttctccagccaatgccggacttcttgaaggttgtaggagaaggggccctttcctcccagataagcaattttctgtctctgcacaatgcacacacgttcaaaggctaccccgtaagctatgttggcgttattgtccatgcggtcagccacaactcggcactggggcggcaaggagaaacgctccagaagctgctgggctgctgcacatcgatcttcctggttctggtgcttcttcacctcaaaagacaaagaggagtcccccggtatcgcccagccatctgatggatgagcctcatcaatgtagaccagcaggaagtcagccactgaggagaactcttccaccagtttgcggaaggctggcagctggctcgtgaaaggaggtcaagtggctgagccaaagttgaccactagtgggcgctcagggctggcaaagtcaagaaggtggcatgtggctccctcagctatcttctcctgggtaccattgccactgttgtcacctccttctgYactggagacatgcaccacactggaattggggNcatcc[T]cacccaatttcacctgacggtaaaaNNNNNNaaRaNNNaaRaagaagaagaaggtgagaatatcacatYaaacacattgccacttgaattcacattaaataRttacaattggctctaatagagtgtggtatttccttcagagcatttggtaaacatttattgatttgagtaaagaggcatgatggcaggtaatgtaaagaatggcccaaaagacaaWaaaagtctttttcattctgtatagtcactgaagataattattttcatcactgaaggcactggagttaactctttttaaaattaagccaaggctgKtattctttactMtccttattttgctgtcaattcttaacatgcattctataacaaatgattaattgacttcattttaaaaattagaagcaaatggtctactttaagacaaattatcagggtcttgggacatggtccctctttctgaattctgaaacaccaggcaggaccttcattttcttgcatgatactaagtcatttaatctcaaccaatggccagtgataccagtgggctctattcttggccagatctagaaaacctgaggtctaccacttataagaagtgttactt

Reverse Complement

HGVS Names

Gene Name	Strand	cDNA HGVS Name	Protein HGVS Name
DIO2	-	NM_001007023.2:c.344A>C	NP_001007024.1:p.E115A
DIO2	-	NM_000793.4:c.236A>C	NP_000784.2:p.E79A
DIO2	-	NM_013989.3:c.236A>C	NP_054644.1:p.E79A
DIO2	-	NM_001007023.2:c.344A>C	NP_001007024.1:p.E115A
DIO2	-	NM_013989.3:c.236A>C	NP_054644.1:p.E79A
DIO2	-	NM_000793.4:c.236A>C	NP_000784.2:p.E79A

Genotype (All Genotype are displayed on + strand of chromosome)

Population:

SNP500

Total:

102

Assay:

Sequencing

Completed:

102

Genotype Counts:

Subpopulations	Genotypic	Allelic
Subpopulations	T/T	T
Total Completed	102/102 (1.000)	204/204 (1.000)
Afr/Afr American	24/24 (1.000)	48/48 (1.000)
Caucasian	31/31 (1.000)	62/62 (1.000)
Hispanic	23/23 (1.000)	46/46 (1.000)
Pacific Rim	24/24 (1.000)	48/48 (1.000)

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